BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005H08SP1|AL425442
(796 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1546 1524 0.0
>3x_Contig1546
Length = 12922
Score = 1524 bits (758), Expect = 0.0
Identities = 778/796 (97%)
Strand = Plus / Minus
Query: 1 tccaatgaracctttccccctggtcaaattgtcgatggttatttgctgttctcgtacttg 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1612 tccaatgaaacctttccccctggtcaaattgtcgatggttatttgctgttctcgtacttg 1553
Query: 61 tttccgcvatgtttggattaattggctcttgcttacgttgctgtcggcttcgttacgctt 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1552 tttccgcaatgtttggattaattggctcttgcttacgttgctgtcggcttcgttacgctt 1493
Query: 121 tacagccaaactgatgttttttgccctgctggcgaaccgtatcgtattgatagattccgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1492 tacagccaaactgatgttttttgccctgctggcgaaccgtatcgtattgatagattccgt 1433
Query: 181 acttgtctcgggccttgtatccacagtacatatggtagcgactaacgagtccccgcttag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1432 acttgtctcgggccttgtatccacagtacatatggtagcgactaacgagtccccgcttag 1373
Query: 241 tgcaggttgtaatattcttgttaacttggaatctctgtatggratatggcctacatttgt 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1372 tgcaggttgtaatattcttgttaacttggaatctctgtatggaatatggcctacatttgt 1313
Query: 301 agaaaggcccgaactttccatactcaatttagatatcactgttccaagagctaataacga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1312 agaaaggcccgaactttccatactcaatttagatatcactgttccaagagctaataacga 1253
Query: 361 tttgttgatgtaagctccctctttccttctttcttgttgccccgtagctctttcggaccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1252 tttgttgatgtaagctccctctttccttctttcttgttgccccgtagctctttcggaccc 1193
Query: 421 agctaaatcacacagagataatgtactcatcacttgctcgccagttatttcatcggtgca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1192 agctaaatcacacagagataatgtactcatcacttgctcgccagttatttcatcggtgca 1133
Query: 481 gaatacacggataaggaccacagcgtgakatctakakgatcttktattaamatcagtctc 540
|||||||||||||||||||||||||||| ||||| | |||||| |||||| |||||||||
Sbjct: 1132 gaatacacggataaggaccacagcgtgagatctagaggatcttgtattaaaatcagtctc 1073
Query: 541 tccagtcttacggttatkatctccaatcgatatgcacttcattaactctttattactgct 600
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 tccagtcttacggttatgatctccaatcgatatgcacttcattaactctttattactgct 1013
Query: 601 aacatttctctcaactaaaccaacaactttaaccccgtatttcaagtcatctckaagctt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1012 aacatttctctcaactaaaccaacaactttaaccccgtatttcaagtcatctcgaagctt 953
Query: 661 aagatcattagtcaatgtykaactkkgcaccataatattkctatttaaagttttgccctg 720
|||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||
Sbjct: 952 aagatcattagtcaatgtcgaactgggcaccataatattgctatttaaagttttgccctg 893
Query: 721 tkgtaaattcaatagatcaaatattctctcgttgtaaatttccaaataggatactctgac 780
| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 tggtaaattcaatagttcaaatattctctcgttgtaaatttccaaataggatactctgac 833
Query: 781 agtwaactttttgcga 796
||| ||||||||||||
Sbjct: 832 agtaaactttttgcga 817
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.714 1.32
Gapped
Lambda K H
1.39 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4306
Number of Sequences: 1807
Number of extensions: 4306
Number of successful extensions: 106
Number of sequences better than 1.0e-20: 1
length of query: 796
length of database: 10,358,551
effective HSP length: 16
effective length of query: 780
effective length of database: 10,329,639
effective search space: 8057118420
effective search space used: 8057118420
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (101.0 bits)